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Quality & Testing

How to Read a Peptide Certificate of Analysis (COA), Line by Line

By Codex Research TeamUpdated October 30, 20263 min read
CR
Codex Research TeamPublished October 26, 2026

A certificate of analysis (COA) is the lab report that shows what a specific batch of a compound actually contains. For research peptides it's the single most important document a supplier can give you, because a label is only a claim and the COA is the evidence. This guide explains each section of a typical peptide COA and the details that separate a meaningful report from a decorative one.

Start with the header: is this report for your lot?

Every COA should identify:

  • The compound name exactly as sold
  • A lot or batch number, which should match the number on your vial
  • The testing laboratory, ideally an independent third party
  • A report or sample ID and the date tested

If the lot number on the COA doesn't match the vial, the report tells you about a different batch. A generic "sample COA" that never changes between orders is a red flag.

Identity: is it the right molecule?

Identity is usually confirmed by mass spectrometry (MS), often paired with liquid chromatography as LC-MS. The instrument measures the molecular weight of the material and compares it with the theoretical weight of the expected sequence.

A passing identity result means the main component has the right mass. It's the line that catches the most serious problem: a vial that contains the wrong compound entirely.

Purity: how much of it is the target peptide?

Purity is measured by high-performance liquid chromatography (HPLC), most often reverse-phase HPLC. The sample is pushed through a column that separates its components, and a detector records each one as a peak.

Purity is the target peptide's peak area as a percentage of all detected peaks. A result of 99.2% means 99.2% of what the detector saw was the intended sequence, and 0.8% was something else. Typical impurities are truncated or deletion sequences left over from synthesis.

Purity is not the same as quantity. A vial can be 99% pure and still contain less peptide than its label states, which is why the next line matters.

Net peptide content and potency

Lyophilized peptides are never 100% peptide by weight. The powder also holds counter-ions (often acetate or trifluoroacetate, used during purification) and a small amount of bound water.

Net peptide content or an assay/potency result reports how much actual peptide is in the vial, for example "4.85 mg" on a 5 mg vial. This number is what makes reconstitution math accurate.

Safety and quality screens

Better reports go beyond identity and purity:

Test What it checks
Endotoxin (LAL) Bacterial endotoxin contamination
Sterility Microbial growth
Residual solvents (GC-MS) Solvents left from synthesis
Heavy metals (ICP-OES/MS) Lead, cadmium, arsenic, mercury
Water content / pH Physical properties of the material

Not every research application needs every test, but a report that includes them gives a fuller picture of the lot.

Red flags to watch for

  • No lot number, or a lot number that doesn't match the vial
  • No named laboratory, or a "lab" with no verifiable presence
  • A purity figure with no method listed
  • Identical reports across different products or dates
  • A COA you can only get by emailing and waiting

How Codex Research handles COAs

Every Codex product page shows the full report for the current lot, including identity by LC-MS, HPLC purity, assay, and the safety screens, with the lot number and testing date. BPC-157, for example, lists each test, its specification, method, result and status. If a lot changes, the report on the page changes with it.

Frequently asked questions

What does HPLC purity mean on a peptide COA?
It is the percentage of the detected material that is the target peptide, measured by high-performance liquid chromatography. 99% purity means 99% of what the detector recorded was the intended sequence.
What is the difference between purity and net peptide content?
Purity measures how much of the detected material is the right peptide. Net peptide content measures how much peptide is in the vial by weight, since lyophilized powder also contains counter-ions and water. A vial can be highly pure and still hold less peptide than labelled.
How is peptide identity confirmed?
By mass spectrometry, usually LC-MS, which measures the molecular weight of the material and compares it with the theoretical weight of the expected sequence.
Should a COA match my lot number?
Yes. A COA only describes the batch it tested. The lot number on the report should match the lot printed on your vial.
For research use only. This article summarizes published laboratory and preclinical literature for reference. It is not medical advice. Codex Research products are not FDA approved and are not for human or animal consumption or for any clinical or medical use.

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